Freckles

8K1715

Freckles are small, concentrated spots of melanin on the skin, often appearing on sun-exposed areas and becoming more prominent with sunlight exposure. Research shows that variations near genes involved in pigmentation regulation (like MC1R, TYR, and ASIP) strongly influence freckle formation and distribution. Freckl...

SNP Stats

Mapped
15
Positive
13 (86.7%)
Negative
2 (13.3%)

Genome Matching (1)

Public Results (7,973)

Connected Traits (1)

freckles

Freckles (EFO_0003963) are small, pigmented spots on the skin resulting from localized increases in melanin production, commonly influenced by UV exposure. They are strongly ass...

EFO_0003963

0 evidence22 SNPs1 traits0 studies0 positive · 0 negative

Connected Studies (5)

Skin Phototype and Disease: A Comprehensive Genetic Approach to Pigmentary Traits Pleiotropy Using PRS in the GCAT Cohort.

PubMed 36672889

0 evidence284 SNPs5 traits1 studies0 positive · 0 negative

Genome-wide association study in Japanese females identifies fifteen novel skin-related trait associations.

PubMed 29895819

0 evidence19 SNPs7 traits1 studies0 positive · 0 negative

Web-based, participant-driven studies yield novel genetic associations for common traits.

PubMed 20585627

0 evidence18 SNPs6 traits1 studies0 positive · 0 negative

Connected Genes (5)

BNC2

basonuclin zinc finger protein 2

This gene encodes a conserved zinc finger protein. The encoded protein functions in skin color saturation. Mutations in this gene are associated with facial pigmented spots. Thi...

2 evidence297 SNPs0 traits0 studies1 positive · 1 negative

HSPA12A

heat shock protein family A (Hsp70) member 12A

Predicted to enable ATP binding activity. Located in extracellular exosome. [provided by Alliance of Genome Resources, Apr 2022]

1 evidence36 SNPs0 traits0 studies1 positive · 0 negative

SLC45A2

solute carrier family 45 member 2

This gene encodes a transporter protein that mediates melanin synthesis. The protein is expressed in a high percentage of melanoma cell lines. Mutations in this gene are a cause...

1 evidence29 SNPs0 traits0 studies0 positive · 1 negative

TYR

tyrosinase

The enzyme encoded by this gene catalyzes the first 2 steps, and at least 1 subsequent step, in the conversion of tyrosine to melanin. The enzyme has both tyrosine hydroxylase a...

1 evidence28 SNPs0 traits0 studies1 positive · 0 negative

EIF6

eukaryotic translation initiation factor 6

Hemidesmosomes are structures which link the basal lamina to the intermediate filament cytoskeleton. An important functional component of hemidesmosomes is the integrin beta-4 s...

1 evidence7 SNPs0 traits0 studies1 positive · 0 negative

Connected SNPs (15)

Explore phenotypes in Genodex

Install the app to compare this phenotype with your genomes, inspect private results, and explore the full evidence context.

Download the app