Korean

Korean Genome ProjectEast Asian

This reference genome is built from the Korean Genome Project — Korea4K panel, aggregating short-read whole-genome data from ~4,000 Koreans (Illumina HiSeq X/NovaSeq) with matched health check-up phenotypes; the resource is described in GigaScience (2024) and distributed under controlled access at EGA (EGAS00001007580). Korean genomes cluster within East Asia yet form a distinct axis relative to Japanese and Han Chinese, with fine-scale regional structure observed in principal-component analyses. Here we collapse the study-wide SNP allele counts into a per-locus consensus genotype baseline and use it as a comparative anchor across populations.

Basic Information

Genodex Edge

Phenotypes (120)

Protein Measurement

3,637 of 5,497 SNPs with zeta at 7.034

99.9

Drug Use Measurement

283 of 390 SNPs with zeta at 7.034

99.9

Pain Perception

34 of 42 SNPs with zeta at 7.034

99.9

Language Measurement

78 of 114 SNPs with zeta at 7.034

99.9

Non-word Reading

32 of 43 SNPs with zeta at 6.607

99.9

Intelligence

1,568 of 1,763 SNPs with zeta at 3.430

99.9

BMI-adjusted Waist-hip Ratio

2,639 of 3,185 SNPs with zeta at 2.905

99.8

Suntan

52 of 82 SNPs with zeta at 2.832

99.8

Information Processing Speed

58 of 92 SNPs with zeta at 2.675

99.6

Systolic Blood Pressure

4,120 of 4,722 SNPs with zeta at 2.625

99.6

Hippocampal Volume

223 of 264 SNPs with zeta at 2.509

99.4

Fish Consumption

43 of 51 SNPs with zeta at 2.503

99.4

Sugar Consumption Measurement

65 of 78 SNPs with zeta at 2.171

98.5

Coffee Consumption Measurement

151 of 187 SNPs with zeta at 2.116

98.3

Blood Protein Measurement

383 of 467 SNPs with zeta at 2.012

97.8

Mathematical Ability

2,077 of 2,298 SNPs with zeta at 1.871

96.9

Alcohol Drinking

56 of 61 SNPs with zeta at 1.797

96.4

Behavioral Disinhibition Measurement

84 of 134 SNPs with zeta at 1.508

93.4

Cannabis Use

30 of 42 SNPs with zeta at 1.461

92.8

Total Cholesterol Measurement

2,520 of 3,245 SNPs with zeta at 1.437

92.5

Diastolic Blood Pressure

3,410 of 3,958 SNPs with zeta at 1.402

91.9

Restless Legs

329 of 368 SNPs with zeta at 1.311

90.5

Aging Rate

104 of 123 SNPs with zeta at 1.300

90.3

Social Communication Impairment

19 of 21 SNPs with zeta at 1.281

90.0

Household Income

349 of 383 SNPs with zeta at 1.278

89.9

Appendicular Lean Mass

863 of 1,068 SNPs with zeta at 1.273

89.9

Creativity Measurement

55 of 61 SNPs with zeta at 1.247

89.4

Free Cholesterol Measurement

537 of 712 SNPs with zeta at 1.242

89.3

Brain Attribute

767 of 838 SNPs with zeta at 1.218

88.8

Head Circumference

14 of 16 SNPs with zeta at 1.190

88.3

Memory Performance

296 of 386 SNPs with zeta at 1.073

85.8

Social Inhibition Quality

536 of 574 SNPs with zeta at 1.060

85.6

Response to Reward

22 of 27 SNPs with zeta at 1.032

84.9

Risk Taking Behavior

559 of 626 SNPs with zeta at 1.031

84.9

Word Reading

90 of 92 SNPs with zeta at 1.011

84.4

Word List Delayed Recall Measurement

15 of 17 SNPs with zeta at 1.000

84.1

Freckles

13 of 15 SNPs with zeta at 1.000

84.1

Acne

107 of 123 SNPs with zeta at 0.991

83.9

Age at First Sexual Intercourse

206 of 235 SNPs with zeta at 0.991

83.9

Neuroticism Measurement

1,434 of 1,570 SNPs with zeta at 0.982

83.7

Social Interaction Measurement

55 of 59 SNPs with zeta at 0.966

83.3

Educational Attainment

6,696 of 7,751 SNPs with zeta at 0.958

83.1

Brain Physiology Trait

89 of 105 SNPs with zeta at 0.954

83.0

Myopia

273 of 312 SNPs with zeta at 0.935

82.5

Phoneme Awareness

56 of 58 SNPs with zeta at 0.906

81.8

Vital Capacity

507 of 558 SNPs with zeta at 0.891

81.4

Age at Menopause

182 of 209 SNPs with zeta at 0.793

78.6

Heart Rate

625 of 712 SNPs with zeta at 0.687

75.4

Height Growth Attribute

141 of 196 SNPs with zeta at 0.613

73.0

Seasonal Allergic Rhinitis

46 of 55 SNPs with zeta at 0.572

71.6

Breastfeeding Duration

1,873 of 2,455 SNPs with zeta at 0.549

70.8

Cognitive Function Measurement

972 of 1,231 SNPs with zeta at 0.549

70.8

Eye Color

76 of 103 SNPs with zeta at 0.542

70.6

Sweet Liking Measurement

29 of 29 SNPs with zeta at 0.525

70.0

Loneliness Measurement

27 of 29 SNPs with zeta at 0.491

68.8

Astigmatism

66 of 86 SNPs with zeta at 0.464

67.9

Back Pain

71 of 81 SNPs with zeta at 0.352

63.7

Creatine Measurement

24 of 32 SNPs with zeta at 0.281

61.1

Body Fat Distribution

155 of 180 SNPs with zeta at 0.255

60.1

Tea Consumption Measurement

105 of 123 SNPs with zeta at 0.200

57.9

Feeling Nervous Measurement

58 of 65 SNPs with zeta at 0.184

57.3

Anxiety Measurement

139 of 169 SNPs with zeta at 0.174

56.9

Short Term Memory

153 of 174 SNPs with zeta at 0.123

54.9

Sex Interaction Measurement

129 of 161 SNPs with zeta at 0.089

53.5

Waist-hip Ratio

551 of 645 SNPs with zeta at 0.086

53.4

Growth Rate Attribute

95 of 142 SNPs with zeta at 0.047

51.9

Feeling fed-up measurement

54 of 60 SNPs with zeta at -0.030

48.8

Body Height

20,777 of 25,094 SNPs with zeta at -0.043

48.3

Guilt Measurement

26 of 31 SNPs with zeta at -0.045

48.2

Puberty Onset Measurement

137 of 155 SNPs with zeta at -0.056

47.8

Aggressive Behavior Quality

60 of 82 SNPs with zeta at -0.095

46.2

Feeling Emotionally Hurt Measurement

39 of 46 SNPs with zeta at -0.176

43.0

Taste Liking Measurement

458 of 526 SNPs with zeta at -0.191

42.4

Facial Emotion Recognition Measurement

19 of 24 SNPs with zeta at -0.233

40.8

Skin Pigmentation

187 of 244 SNPs with zeta at -0.276

39.1

Skin Sensitivity to Sun

14 of 16 SNPs with zeta at -0.333

36.9

Hair Color

126 of 185 SNPs with zeta at -0.335

36.9

Hearing Loss

40 of 53 SNPs with zeta at -0.429

33.4

Sexual Activity Behavior Attribute

140 of 158 SNPs with zeta at -0.512

30.4

Lean Body Mass

804 of 1,053 SNPs with zeta at -0.517

30.3

Feeling Miserable Measurement

56 of 64 SNPs with zeta at -0.518

30.2

Physical Activity Measurement

289 of 332 SNPs with zeta at -0.531

29.8

Mood Instability Measurement

74 of 81 SNPs with zeta at -0.570

28.4

Smoking Behavior

396 of 423 SNPs with zeta at -0.593

27.7

Vitamin D Amount

417 of 584 SNPs with zeta at -0.626

26.5

Dental Caries

142 of 159 SNPs with zeta at -0.718

23.6

Irritability Measurement

64 of 67 SNPs with zeta at -0.774

21.9

Feeling Tense Measurement

31 of 33 SNPs with zeta at -0.778

21.8

Facial Wrinkling

13 of 24 SNPs with zeta at -0.797

21.3

Sleep Quality

69 of 140 SNPs with zeta at -0.862

19.4

Worry Measurement

109 of 116 SNPs with zeta at -0.898

18.5

Insomnia

2,420 of 2,710 SNPs with zeta at -0.946

17.2

Waist Circumference

295 of 383 SNPs with zeta at -1.045

14.8

Brain Volume

188 of 244 SNPs with zeta at -1.114

13.3

Cannabis Dependence

27 of 29 SNPs with zeta at -1.123

13.1

Body Mass Index

7,804 of 9,015 SNPs with zeta at -1.190

11.7

Hypermetropia

26 of 29 SNPs with zeta at -1.233

10.9

Brain Connectivity Attribute

279 of 329 SNPs with zeta at -1.327

9.2

Sleep Duration Trait

244 of 306 SNPs with zeta at -1.391

8.2

BMI-adjusted Waist Circumference

2,289 of 2,771 SNPs with zeta at -1.399

8.1

Balding measurement

564 of 667 SNPs with zeta at -1.416

7.8

Aggressive Behavior

19 of 21 SNPs with zeta at -1.583

5.7

Reading and Spelling Ability

82 of 92 SNPs with zeta at -1.597

5.5

BMI-adjusted hip circumference

2,674 of 3,247 SNPs with zeta at -1.715

4.3

Motion Sickness

32 of 35 SNPs with zeta at -1.774

3.8

Body Fat Percentage

525 of 599 SNPs with zeta at -1.789

3.7

Energy Intake

81 of 87 SNPs with zeta at -1.843

3.3

Alcohol Consumption Quality

1,539 of 1,832 SNPs with zeta at -1.897

2.9

Executive Function Measurement

68 of 129 SNPs with zeta at -1.902

2.9

Cigarettes Per Day Measurement

481 of 555 SNPs with zeta at -1.953

2.5

Vitamin B12 Measurement

33 of 41 SNPs with zeta at -1.973

2.4

Hip Circumference

279 of 378 SNPs with zeta at -2.002

2.3

Daytime Rest Measurement

162 of 199 SNPs with zeta at -2.286

1.1

Breast Size

35 of 37 SNPs with zeta at -3.001

0.1

Empathy Measurement

66 of 102 SNPs with zeta at -3.458

0.0

Sex hormone-binding globulin

1,375 of 1,793 SNPs with zeta at -4.120

0.0

Attention Function Measurement

71 of 97 SNPs with zeta at -4.647

0.0

Response to exercise

51 of 57 SNPs with zeta at -6.339

0.0

Circadian Rhythm

38 of 54 SNPs with zeta at -6.361

0.0

Handedness

73 of 86 SNPs with zeta at -7.034

0.0

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